EnhancerDB
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  3. rs5829967[chr2:25515242]
Enhancers that have rs5829967[chr2:25515242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5829967[chr2:25515242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25515225 25515246 IRF1 JASPAR yes 72462645
chr2 25515226 25515247 IRF1 JASPAR yes 72462646
chr2 25515227 25515247 RREB1 JASPAR yes 72462647
chr2 25515228 25515242 IRF7 JASPAR yes 72462648
chr2 25515230 25515242 IRF1 JASPAR yes 72462649
chr2 25515230 25515245 STAT2 JASPAR yes 72462650
chr2 25515231 25515246 FOXP1 JASPAR yes 72462651
chr2 25515231 25515252 IRF1 JASPAR yes 72462652
chr2 25515232 25515253 IRF1 JASPAR yes 72462653
chr2 25515233 25515253 RREB1 JASPAR yes 72462654
chr2 25515234 25515248 IRF7 JASPAR yes 72462655
chr2 25515237 25515252 MEF2C JASPAR yes 72462656
Genes associated with rs5829967[chr2:25515242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More