EnhancerDB
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  3. rs5829991[chr2:26276588]
Enhancers that have rs5829991[chr2:26276588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs5829991[chr2:26276588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26276578 26276599 IRF1 JASPAR yes 72519252
chr2 26276582 26276603 IRF1 JASPAR yes 72519254
chr2 26276583 26276598 FOXP1 JASPAR yes 72519255
chr2 26276585 26276600 FOXP1 JASPAR yes 72519256
chr2 26276587 26276602 FOXP1 JASPAR yes 72519257
chr2 26276588 26276603 FOXP1 JASPAR yes 72519258
chr2 26276588 26276603 MEF2C JASPAR yes 72519259
Genes associated with rs5829991[chr2:26276588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More