EnhancerDB
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  3. rs58300078[chr17:64544482]
Enhancers that have rs58300078[chr17:64544482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
chr17 64544411 64544774 vista25601
VISTA
Transcript factors that have rs58300078[chr17:64544482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64544252 64544662 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21781845
chr17 64544252 64544662 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108284961
chr17 64544329 64544519 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21781846
chr17 64544329 64544519 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108284962
chr17 64544331 64544587 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21781847
chr17 64544331 64544587 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108284963
chr17 64544469 64544490 ZNF263 JASPAR yes 21277698
chr17 64544469 64544490 ZNF263 JASPAR yes 55447328
chr17 64544475 64544486 E2F1 JASPAR yes 21277699
chr17 64544475 64544486 E2F1 JASPAR yes 55447329
chr17 64544481 64544492 E2F6 JASPAR yes 21277700
chr17 64544481 64544492 E2F6 JASPAR yes 55447330
Genes associated with rs58300078[chr17:64544482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More