EnhancerDB
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  3. rs5830518[chr2:38373354]
Enhancers that have rs5830518[chr2:38373354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38370585 38382295 enh18455
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr2 38372999 38373624 vista31089
VISTA
Transcript factors that have rs5830518[chr2:38373354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38373333 38373354 ZNF263 JASPAR yes 22037022
chr2 38373333 38373354 ZNF263 JASPAR yes 73113786
chr2 38373334 38373355 IRF1 JASPAR yes 22037023
chr2 38373334 38373355 IRF1 JASPAR yes 73113787
chr2 38373336 38373357 ZNF263 JASPAR yes 22037024
chr2 38373336 38373357 ZNF263 JASPAR yes 73113788
chr2 38373339 38373360 ZNF263 JASPAR yes 22037028
chr2 38373339 38373360 ZNF263 JASPAR yes 73113792
chr2 38373343 38373364 IRF1 JASPAR yes 22037030
chr2 38373343 38373364 IRF1 JASPAR yes 73113794
chr2 38373344 38373359 FOXP1 JASPAR yes 22037031
chr2 38373344 38373359 FOXP1 JASPAR yes 73113795
chr2 38373347 38373361 STAT1 JASPAR yes 22037032
chr2 38373347 38373361 STAT1 JASPAR yes 73113796
chr2 38373347 38373362 PRDM1 JASPAR yes 22037033
chr2 38373347 38373362 STAT2 JASPAR yes 22037034
chr2 38373347 38373362 PRDM1 JASPAR yes 73113797
chr2 38373347 38373362 STAT2 JASPAR yes 73113798
Genes associated with rs5830518[chr2:38373354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More