EnhancerDB
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  3. rs58327182[chr6:42364239]
Enhancers that have rs58327182[chr6:42364239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs58327182[chr6:42364239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42364224 42364240 POU4F2 JASPAR yes 101717018
chr6 42364224 42364240 POU4F3 JASPAR yes 101717019
chr6 42364226 42364240 ONECUT3 JASPAR yes 101717020
chr6 42364227 42364243 SOX8 JASPAR yes 101717021
chr6 42364236 42364240 YY1 TRANSFAC yes 101717022
chr6 42364239 42364249 HOXA13 JASPAR yes 101717023
chr6 42364239 42364249 HOXB13 JASPAR yes 101717024
chr6 42364239 42364249 HOXD13 JASPAR yes 101717025
chr6 42364239 42364250 HOXA10 JASPAR yes 101717026
Genes associated with rs58327182[chr6:42364239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More