EnhancerDB
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  3. rs5838546[chr2:216649010]
Enhancers that have rs5838546[chr2:216649010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216643265 216664715 enh19204
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs5838546[chr2:216649010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216648989 216649010 IRF1 JASPAR yes 80807072
chr2 216648994 216649015 IRF1 JASPAR yes 80807076
chr2 216648996 216649016 RREB1 JASPAR yes 80807078
chr2 216648998 216649013 STAT2 JASPAR yes 80807080
chr2 216648999 216649011 IRF1 JASPAR yes 80807081
chr2 216648999 216649014 FOXP1 JASPAR yes 80807082
chr2 216648999 216649020 IRF1 JASPAR yes 80807083
chr2 216649000 216649021 IRF1 JASPAR yes 80807084
chr2 216649001 216649021 RREB1 JASPAR yes 80807085
chr2 216649004 216649019 FOXP1 JASPAR yes 80807086
chr2 216649005 216649026 IRF1 JASPAR yes 80807087
chr2 216649006 216649021 FOXP1 JASPAR yes 80807088
chr2 216649006 216649026 RREB1 JASPAR yes 80807089
chr2 216649006 216649027 IRF1 JASPAR yes 80807090
chr2 216649007 216649022 FOXP1 JASPAR yes 80807091
chr2 216649007 216649028 IRF1 JASPAR yes 80807092
chr2 216649008 216649023 FOXP1 JASPAR yes 80807093
chr2 216649010 216649025 FOXP1 JASPAR yes 80807094
Genes associated with rs5838546[chr2:216649010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More