EnhancerDB
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  3. rs58389727[chr12:116898167]
Enhancers that have rs58389727[chr12:116898167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs58389727[chr12:116898167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116897686 116898282 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21577049
chr12 116897889 116898485 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21577050
chr12 116898165 116898180 HNF4G JASPAR yes 123998207
chr12 116898166 116898180 RXRB JASPAR yes 123998208
chr12 116898166 116898180 RXRG JASPAR yes 123998209
chr12 116898166 116898181 HNF4A JASPAR yes 123998210
Genes associated with rs58389727[chr12:116898167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More