EnhancerDB
  1. Home
  2. SNP
  3. rs5839700[chr2:239346203]
Enhancers that have rs5839700[chr2:239346203]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 239345575 239352887 enh59039
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Heart
Transcript factors that have rs5839700[chr2:239346203]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 239346197 239346218 IRF1 JASPAR yes 82168797
chr2 239346198 239346219 IRF1 JASPAR yes 82168798
chr2 239346199 239346220 IRF1 JASPAR yes 82168799
chr2 239346202 239346217 FOXP1 JASPAR yes 82168800
chr2 239346203 239346218 FOXP1 JASPAR yes 82168801
chr2 239346203 239346224 IRF1 JASPAR yes 82168802
Genes associated with rs5839700[chr2:239346203], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More