EnhancerDB
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  3. rs58404002[chr12:65015996]
Enhancers that have rs58404002[chr12:65015996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs58404002[chr12:65015996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65014870 65016352 ZNF274 GTRD no Liver (HepG2) 21552794
chr12 65014870 65016352 ZNF274 GTRD no Liver (HepG2) 108041778
chr12 65015976 65015997 REST JASPAR yes 121416930
chr12 65015991 65016012 IRF1 JASPAR yes 121416931
chr12 65015994 65015998 YY1 TRANSFAC yes 121416932
chr12 65015995 65016010 FOXP1 JASPAR yes 121416933
chr12 65015996 65016011 FOXP1 JASPAR yes 121416934
chr12 65015996 65016017 IRF1 JASPAR yes 121416935
Genes associated with rs58404002[chr12:65015996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More