EnhancerDB
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  3. rs58406508[chr19:2548803]
Enhancers that have rs58406508[chr19:2548803]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58406508[chr19:2548803]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2548788 2548808 RREB1 JASPAR yes 112073137
chr19 2548790 2548810 RREB1 JASPAR yes 112073138
chr19 2548793 2548813 RREB1 JASPAR yes 112073140
chr19 2548795 2548815 RREB1 JASPAR yes 112073141
chr19 2548796 2548811 FOXP1 JASPAR yes 112073142
chr19 2548798 2548818 RREB1 JASPAR yes 112073143
chr19 2548800 2548815 FOXP1 JASPAR yes 112073144
chr19 2548801 2548812 FOXA1 JASPAR yes 112073145
chr19 2548801 2548816 FOXA1 JASPAR yes 112073146
chr19 2548802 2548814 FOXC2 JASPAR yes 112073147
chr19 2548802 2548822 RREB1 JASPAR yes 112073148
chr19 2548803 2548815 FOXI1 JASPAR yes 112073149
Genes associated with rs58406508[chr19:2548803], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More