EnhancerDB
  1. Home
  2. SNP
  3. rs58406857[chr5:78039885]
Enhancers that have rs58406857[chr5:78039885]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs58406857[chr5:78039885]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78039879 78039894 FOXP1 JASPAR yes 63620342
chr5 78039879 78039900 IRF1 JASPAR yes 63620343
chr5 78039883 78039898 STAT2 JASPAR yes 63620344
chr5 78039884 78039899 FOXP1 JASPAR yes 63620345
chr5 78039884 78039905 IRF1 JASPAR yes 63620346
Genes associated with rs58406857[chr5:78039885], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More