EnhancerDB
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  3. rs58409303[chr1:205250219]
Enhancers that have rs58409303[chr1:205250219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs58409303[chr1:205250219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205248462 205251020 ZNF143 GTRD no Epithelial (MCF-7) 21371243
chr1 205250217 205250228 FOXA1 JASPAR yes 34750800
chr1 205250217 205250232 FOXA1 JASPAR yes 34750801
chr1 205250218 205250230 FOXC2 JASPAR yes 34750802
chr1 205250218 205250238 RREB1 JASPAR yes 34750803
chr1 205250219 205250231 FOXI1 JASPAR yes 34750804
chr1 205250219 205250239 RREB1 JASPAR yes 34750805
Genes associated with rs58409303[chr1:205250219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More