EnhancerDB
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  3. rs58419250[chr17:78773313]
Enhancers that have rs58419250[chr17:78773313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs58419250[chr17:78773313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78773307 78773319 POU2F1 JASPAR yes 56281368
chr17 78773308 78773320 POU3F1 JASPAR yes 56281369
chr17 78773308 78773320 POU3F2 JASPAR yes 56281370
chr17 78773309 78773319 NFATC3 JASPAR yes 56281371
Genes associated with rs58419250[chr17:78773313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More