EnhancerDB
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  3. rs58459403[chr1:153499899]
Enhancers that have rs58459403[chr1:153499899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58459403[chr1:153499899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153499821 153500110 TCF7L2 GTRD no Colon (HCT116) 21339717
chr1 153499833 153500157 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339718
chr1 153499843 153500233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339719
chr1 153499891 153499902 NFKB1 JASPAR yes 32257530
Genes associated with rs58459403[chr1:153499899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154298029 154323783 + ATP8B2 ENSG00000143515.12 154298029 798130 Stomach 0.211524 1299