EnhancerDB
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  3. rs58468795[chr1:54828639]
Enhancers that have rs58468795[chr1:54828639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs58468795[chr1:54828639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54828630 54828640 SP1 JASPAR yes 28977858
chr1 54828631 54828639 SP1 TRANSFAC yes 28977859
chr1 54828631 54828640 SP1 TRANSFAC yes 28977860
chr1 54828633 54828639 SP1 TRANSFAC yes 28977863
chr1 54828637 54828641 LFA1 TRANSFAC yes 28977864
Genes associated with rs58468795[chr1:54828639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More