EnhancerDB
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  3. rs58479646[chr12:50907656]
Enhancers that have rs58479646[chr12:50907656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs58479646[chr12:50907656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50907653 50907668 FOXP1 JASPAR yes 120836262
chr12 50907654 50907669 FOXP1 JASPAR yes 120836263
chr12 50907655 50907670 FOXP1 JASPAR yes 120836264
chr12 50907656 50907671 FOXP1 JASPAR yes 120836265
Genes associated with rs58479646[chr12:50907656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More