EnhancerDB
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  3. rs58479884[chr17:41523668]
Enhancers that have rs58479884[chr17:41523668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs58479884[chr17:41523668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523013 41524154 AR GTRD no Prostate (PC-3) 21760400
chr17 41523363 41525123 ZNF143 GTRD no Epithelial (MCF-7) 21760403
chr17 41523419 41524927 ZNF143 GTRD no Epithelial (MCF-7) 21760404
chr17 41523503 41524516 ZNF274 GTRD no Cervix (HeLa-S3) 21760405
chr17 41523541 41524874 ZNF143 GTRD no Epithelial (MCF-7) 21760406
chr17 41523622 41524326 ZNF143 GTRD no Epithelial (MCF-7) 21760407
chr17 41523624 41525585 ZNF143 GTRD no Epithelial (MCF-7) 21760408
chr17 41523633 41524612 ZNF143 GTRD no Epithelial (MCF-7) 21760409
chr17 41523639 41524060 ZNF143 GTRD no Epithelial (MCF-7) 21760410
chr17 41523647 41525933 ZNF143 GTRD no Epithelial (MCF-7) 21760411
chr17 41523659 41525014 ZNF143 GTRD no Epithelial (MCF-7) 21760412
chr17 41523660 41526159 ZNF143 GTRD no Epithelial (MCF-7) 21760413
chr17 41523663 41525001 ZNF143 GTRD no Epithelial (MCF-7) 21760414
chr17 41523664 41523669 SP1 TRANSFAC yes 54347480
Genes associated with rs58479884[chr17:41523668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More