EnhancerDB
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  3. rs58541550[chr2:25839551]
Enhancers that have rs58541550[chr2:25839551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25836360 25845235 enh33144
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs58541550[chr2:25839551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25839542 25839551 PITX3 JASPAR yes 72490872
chr2 25839542 25839552 GSC2 JASPAR yes 72490873
chr2 25839542 25839552 GSC JASPAR yes 72490874
chr2 25839543 25839551 OTX1 JASPAR yes 72490875
chr2 25839544 25839565 LUN1 TRANSFAC yes 72490876
Genes associated with rs58541550[chr2:25839551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More