EnhancerDB
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  3. rs58547897[chr2:228276352]
Enhancers that have rs58547897[chr2:228276352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58547897[chr2:228276352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228275955 228276504 NFIC UCSC Txn Factor no Conserved 108435515
chr2 228275986 228276452 RUNX3 UCSC Txn Factor no Conserved 108435516
chr2 228276074 228276501 RELA UCSC Txn Factor no Conserved 108435517
chr2 228276133 228276454 EBF1 UCSC Txn Factor no Conserved 108435518
chr2 228276340 228276358 IRF2 JASPAR yes 81520417
chr2 228276341 228276362 IRF1 JASPAR yes 81520418
chr2 228276345 228276357 IRF1 JASPAR yes 81520419
chr2 228276346 228276361 MEF2A JASPAR yes 81520420
chr2 228276347 228276362 MEF2C JASPAR yes 81520421
chr2 228276348 228276360 MEF2A JASPAR yes 81520422
chr2 228276350 228276354 YY1 TRANSFAC yes 81520423
Genes associated with rs58547897[chr2:228276352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More