EnhancerDB
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  3. rs5861533[chr4:122612479]
Enhancers that have rs5861533[chr4:122612479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 122607570 122615535 enh21754
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9)
Transcript factors that have rs5861533[chr4:122612479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 122611877 122613439 POLR2A UCSC Txn Factor no Conserved 108533344
chr4 122612473 122612483 NFIA JASPAR yes 92460215
chr4 122612474 122612489 MEF2C JASPAR yes 92460216
chr4 122612475 122612481 NFIC JASPAR yes 92460217
chr4 122612479 122612500 IRF1 JASPAR yes 92460218
Genes associated with rs5861533[chr4:122612479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More