EnhancerDB
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  3. rs58660508[chr1:225637224]
Enhancers that have rs58660508[chr1:225637224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58660508[chr1:225637224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225636798 225637448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384734
chr1 225636919 225637249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384735
chr1 225636919 225637303 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384736
chr1 225636945 225637275 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384737
chr1 225636969 225637365 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384738
chr1 225636972 225637232 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384739
chr1 225636979 225637299 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384740
chr1 225636996 225637336 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384741
chr1 225637050 225637280 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384742
chr1 225637063 225637323 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384743
chr1 225637077 225637593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384744
chr1 225637084 225637248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384745
chr1 225637220 225637233 EOMES JASPAR yes 35741509
chr1 225637222 225637226 ESR1 TRANSFAC yes 35741510
chr1 225637223 225637233 TBX21 JASPAR yes 35741511
chr1 225637224 225637232 MGA JASPAR yes 35741512
chr1 225637224 225637232 TBX15 JASPAR yes 35741513
chr1 225637224 225637232 TBX1 JASPAR yes 35741514
chr1 225637224 225637232 TBX4 JASPAR yes 35741515
chr1 225637224 225637232 TBX5 JASPAR yes 35741516
Genes associated with rs58660508[chr1:225637224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More