EnhancerDB
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  3. rs58668790[chr2:28888229]
Enhancers that have rs58668790[chr2:28888229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58668790[chr2:28888229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28888225 28888230 SP1 TRANSFAC yes 72666437
chr2 28888227 28888232 TFAP2A TRANSFAC yes 72666438
chr2 28888227 28888233 MZF1 JASPAR yes 72666439
chr2 28888228 28888238 SP1 JASPAR yes 72666440
Genes associated with rs58668790[chr2:28888229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More