EnhancerDB
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  3. rs58680142[chr1:16511896]
Enhancers that have rs58680142[chr1:16511896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58680142[chr1:16511896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16511877 16511898 IRF1 JASPAR yes 27032792
chr1 16511881 16511902 IRF1 JASPAR yes 27032795
chr1 16511882 16511897 FOXP1 JASPAR yes 27032796
chr1 16511883 16511898 FOXP1 JASPAR yes 27032797
chr1 16511883 16511904 IRF1 JASPAR yes 27032798
chr1 16511885 16511906 IRF1 JASPAR yes 27032799
chr1 16511887 16511908 IRF1 JASPAR yes 27032800
chr1 16511888 16511903 FOXP1 JASPAR yes 27032801
chr1 16511889 16511910 IRF1 JASPAR yes 27032802
chr1 16511890 16511905 FOXP1 JASPAR yes 27032803
chr1 16511890 16511911 IRF1 JASPAR yes 27032804
chr1 16511891 16511906 FOXP1 JASPAR yes 27032805
chr1 16511891 16511912 IRF1 JASPAR yes 27032806
chr1 16511895 16511916 IRF1 JASPAR yes 27032807
chr1 16511896 16511911 FOXP1 JASPAR yes 27032808
chr1 16511896 16511917 IRF1 JASPAR yes 27032809
Genes associated with rs58680142[chr1:16511896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More