EnhancerDB
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  3. rs58681483[chr17:57934654]
Enhancers that have rs58681483[chr17:57934654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 57934217 57936802 vista708
VISTA
Transcript factors that have rs58681483[chr17:57934654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57934379 57935792 ZBTB33 GTRD no Lung (A549) 107689049
chr17 57934581 57936819 ZNF143 GTRD no Epithelial (MCF-7) 21776956
chr17 57934581 57936819 ZNF143 GTRD no Epithelial (MCF-7) 107689050
chr17 57934590 57934815 ZNF274 GTRD no Bone Marrow (K562) 107689051
chr17 57934620 57934944 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107689052
chr17 57934643 57934664 ZNF263 JASPAR yes 17052
chr17 57934643 57934664 ZNF263 JASPAR yes 55089875
chr17 57934645 57934659 PLAG1 JASPAR yes 17053
chr17 57934645 57934659 PLAG1 JASPAR yes 55089876
chr17 57934646 57934667 ZNF263 JASPAR yes 17054
chr17 57934646 57934667 ZNF263 JASPAR yes 55089877
chr17 57934649 57934654 GATA2 JASPAR yes 17056
chr17 57934649 57934654 GATA2 JASPAR yes 55089879
chr17 57934653 57934663 SP1 JASPAR yes 17057
chr17 57934653 57934663 SP1 JASPAR yes 55089880
chr17 57934654 57934663 SP1 TRANSFAC yes 17058
chr17 57934654 57934663 SP1 TRANSFAC yes 55089881
Genes associated with rs58681483[chr17:57934654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More