EnhancerDB
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  3. rs5873339[chr5:172174114]
Enhancers that have rs5873339[chr5:172174114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5873339[chr5:172174114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172174109 172174124 MEF2C JASPAR yes 67821649
chr5 172174111 172174126 FOXP1 JASPAR yes 67821650
chr5 172174112 172174127 FOXP1 JASPAR yes 67821651
chr5 172174113 172174119 TBP TRANSFAC yes 67821652
chr5 172174113 172174128 FOXP1 JASPAR yes 67821653
chr5 172174114 172174129 FOXP1 JASPAR yes 67821654
Genes associated with rs5873339[chr5:172174114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More