EnhancerDB
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  3. rs58748550[chr17:55975015]
Enhancers that have rs58748550[chr17:55975015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs58748550[chr17:55975015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55975009 55975024 FOXP1 JASPAR yes 54996485
chr17 55975009 55975030 IRF1 JASPAR yes 54996486
chr17 55975010 55975025 FOXP1 JASPAR yes 54996487
chr17 55975010 55975031 IRF1 JASPAR yes 54996488
chr17 55975011 55975026 FOXP1 JASPAR yes 54996489
chr17 55975011 55975032 IRF1 JASPAR yes 54996490
chr17 55975012 55975027 FOXP1 JASPAR yes 54996491
chr17 55975013 55975028 FOXP1 JASPAR yes 54996492
chr17 55975014 55975029 FOXP1 JASPAR yes 54996493
chr17 55975014 55975035 IRF1 JASPAR yes 54996494
chr17 55975015 55975030 FOXP1 JASPAR yes 54996495
chr17 55975015 55975036 IRF1 JASPAR yes 54996496
Genes associated with rs58748550[chr17:55975015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More