EnhancerDB
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  3. rs5875021[chr6:25193720]
Enhancers that have rs5875021[chr6:25193720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25190305 25204995 enh23130
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Brain (SK-N-MC) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Uterus Heart
chr6 25193718 25194203 vista51378
VISTA
Transcript factors that have rs5875021[chr6:25193720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25193708 25193722 TLX1 JASPAR yes 70336897
chr6 25193708 25193722 TLX1 JASPAR yes 100834128
chr6 25193715 25193730 MEF2C JASPAR yes 70336898
chr6 25193715 25193730 MEF2C JASPAR yes 100834129
chr6 25193718 25193733 FOXP1 JASPAR yes 70336899
chr6 25193718 25193733 FOXP1 JASPAR yes 100834130
chr6 25193719 25193734 FOXP1 JASPAR yes 70336900
chr6 25193719 25193734 FOXP1 JASPAR yes 100834131
chr6 25193719 25193740 IRF1 JASPAR yes 70336901
chr6 25193719 25193740 IRF1 JASPAR yes 100834132
chr6 25193720 25193735 FOXP1 JASPAR yes 70336902
chr6 25193720 25193735 FOXP1 JASPAR yes 100834133
chr6 25193720 25193741 IRF1 JASPAR yes 70336903
chr6 25193720 25193741 IRF1 JASPAR yes 100834134
Genes associated with rs5875021[chr6:25193720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More