EnhancerDB
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  3. rs5875552[chr6:36577823]
Enhancers that have rs5875552[chr6:36577823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36569515 36588579 enh23193
Liver Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs5875552[chr6:36577823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36577817 36577838 IRF1 JASPAR yes 101348725
chr6 36577818 36577839 IRF1 JASPAR yes 101348726
chr6 36577822 36577837 FOXP1 JASPAR yes 101348727
chr6 36577823 36577838 FOXP1 JASPAR yes 101348728
Genes associated with rs5875552[chr6:36577823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More