EnhancerDB
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  3. rs58786587[chr19:13964152]
Enhancers that have rs58786587[chr19:13964152]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58786587[chr19:13964152]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13962999 13964156 ZNF274 GTRD no Bone Marrow (K562) 21852734
chr19 13963201 13964202 ZNF143 GTRD no Epithelial (MCF-7) 21852737
chr19 13963498 13964152 ZNF274 GTRD no Blood (GM12878) 21852741
chr19 13963572 13964189 TCF7L2 GTRD no Colon (HCT116) 21852743
chr19 13963597 13964254 ZNF274 GTRD no Blood (GM12878) 21852744
chr19 13963771 13964196 ZNF274 GTRD no Blood (GM12878) 21852746
chr19 13963859 13964181 ZNF274 GTRD no Blood (GM12878) 21852748
chr19 13963903 13964257 ZNF274 GTRD no Blood (GM12878) 21852749
chr19 13964073 13964537 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852750
chr19 13964143 13964164 IRF1 JASPAR yes 112538792
chr19 13964143 13964482 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852751
chr19 13964148 13964169 IRF1 JASPAR yes 112538794
chr19 13964152 13964156 YY1 TRANSFAC yes 112538795
Genes associated with rs58786587[chr19:13964152], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More