EnhancerDB
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  3. rs587927[chr12:121288317]
Enhancers that have rs587927[chr12:121288317]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs587927[chr12:121288317]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121288296 121288317 IRF1 JASPAR yes 124189304
chr12 121288297 121288318 IRF1 JASPAR yes 124189306
chr12 121288298 121288319 IRF1 JASPAR yes 124189308
chr12 121288299 121288320 IRF1 JASPAR yes 124189310
chr12 121288300 121288321 IRF1 JASPAR yes 124189312
chr12 121288301 121288322 IRF1 JASPAR yes 124189314
chr12 121288302 121288317 FOXP1 JASPAR yes 124189315
chr12 121288304 121288319 FOXP1 JASPAR yes 124189316
chr12 121288305 121288320 STAT2 JASPAR yes 124189317
chr12 121288306 121288321 FOXP1 JASPAR yes 124189318
chr12 121288306 121288327 IRF1 JASPAR yes 124189319
chr12 121288308 121288320 FOXC2 JASPAR yes 124189320
chr12 121288309 121288320 FOXP2 JASPAR yes 124189321
chr12 121288310 121288325 STAT2 JASPAR yes 124189322
chr12 121288311 121288323 IRF1 JASPAR yes 124189323
Genes associated with rs587927[chr12:121288317], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More