EnhancerDB
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  3. rs5880341[chr6:137560990]
Enhancers that have rs5880341[chr6:137560990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 137543045 137565455 enh23656
Brain (SK-N-MC) Liver Astrocyte Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5880341[chr6:137560990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 137560985 137561000 MEF2C JASPAR yes 105629089
chr6 137560986 137561001 MEF2A JASPAR yes 105629090
chr6 137560988 137561003 FOXP1 JASPAR yes 105629091
chr6 137560989 137560995 TBP TRANSFAC yes 105629092
chr6 137560989 137561004 FOXP1 JASPAR yes 105629093
chr6 137560989 137561010 IRF1 JASPAR yes 105629094
chr6 137560990 137561005 FOXP1 JASPAR yes 105629095
chr6 137560990 137561011 IRF1 JASPAR yes 105629096
Genes associated with rs5880341[chr6:137560990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More