EnhancerDB
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  3. rs58824939[chr6:13422261]
Enhancers that have rs58824939[chr6:13422261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs58824939[chr6:13422261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13422251 13422262 FOXH1 JASPAR yes 100028776
chr6 13422254 13422267 SCRT2 JASPAR yes 100028777
chr6 13422254 13422269 SCRT1 JASPAR yes 100028778
Genes associated with rs58824939[chr6:13422261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More