EnhancerDB
  1. Home
  2. SNP
  3. rs58843020[chr1:27353297]
Enhancers that have rs58843020[chr1:27353297]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27351515 27365695 enh11658
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs58843020[chr1:27353297]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27352934 27353967 TCF7L2 GTRD no Colon (HCT116) 107802565
chr1 27353289 27353301 FOXC2 JASPAR yes 27669864
chr1 27353289 27353303 ONECUT2 JASPAR yes 27669865
chr1 27353289 27353303 ONECUT3 JASPAR yes 27669866
chr1 27353289 27353305 POU4F2 JASPAR yes 27669867
chr1 27353289 27353305 POU4F3 JASPAR yes 27669868
chr1 27353291 27353305 POU4F1 JASPAR yes 27669870
chr1 27353292 27353303 CDX2 JASPAR yes 27669871
chr1 27353292 27353306 POU4F1 JASPAR yes 27669872
chr1 27353293 27353309 POU4F2 JASPAR yes 27669873
chr1 27353293 27353309 POU4F3 JASPAR yes 27669874
chr1 27353294 27353309 FOXA1 JASPAR yes 27669875
chr1 27353295 27353307 FOXI1 JASPAR yes 27669876
chr1 27353295 27353309 POU4F1 JASPAR yes 27669877
chr1 27353295 27353310 HNF1A JASPAR yes 27669878
chr1 27353296 27353308 FOXC2 JASPAR yes 27669879
chr1 27353296 27353309 HNF1B JASPAR yes 27669880
chr1 27353296 27353310 ONECUT2 JASPAR yes 27669881
chr1 27353296 27353310 ONECUT3 JASPAR yes 27669882
chr1 27353296 27353310 POU4F1 JASPAR yes 27669883
chr1 27353297 27353308 FOXB1 JASPAR yes 27669884
chr1 27353297 27353308 FOXC1 JASPAR yes 27669885
chr1 27353297 27353308 PROP1 JASPAR yes 27669886
chr1 27353297 27353313 POU4F2 JASPAR yes 27669887
chr1 27353297 27353313 POU4F3 JASPAR yes 27669888
Genes associated with rs58843020[chr1:27353297], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More