EnhancerDB
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  3. rs5887489[chr7:130696597]
Enhancers that have rs5887489[chr7:130696597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 130661945 130708935 enh10038
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs5887489[chr7:130696597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 130696592 130696607 MEF2C JASPAR yes 18050927
chr7 130696595 130696610 FOXP1 JASPAR yes 18050928
chr7 130696596 130696602 TBP TRANSFAC yes 18050929
chr7 130696596 130696611 FOXP1 JASPAR yes 18050930
chr7 130696596 130696617 IRF1 JASPAR yes 18050931
chr7 130696597 130696612 FOXP1 JASPAR yes 18050932
chr7 130696597 130696618 IRF1 JASPAR yes 18050933
Genes associated with rs5887489[chr7:130696597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More