EnhancerDB
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  3. rs58885260[chr1:12615670]
Enhancers that have rs58885260[chr1:12615670]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs58885260[chr1:12615670]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802127
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802128
chr1 12615663 12615676 ELF1 JASPAR yes 26833486
chr1 12615664 12615674 ELK1 JASPAR yes 26833487
chr1 12615664 12615676 EHF JASPAR yes 26833488
chr1 12615664 12615676 ELF1 JASPAR yes 26833489
chr1 12615664 12615676 ELF4 JASPAR yes 26833490
chr1 12615664 12615677 ELF3 JASPAR yes 26833491
chr1 12615665 12615676 ELF5 JASPAR yes 26833492
chr1 12615665 12615676 SPDEF JASPAR yes 26833493
chr1 12615666 12615675 ELK4 JASPAR yes 26833494
chr1 12615666 12615676 GABPA JASPAR yes 26833495
chr1 12615666 12615677 ELK4 JASPAR yes 26833496
chr1 12615668 12615674 ETS1 JASPAR yes 26833497
chr1 12615668 12615674 SPI1 JASPAR yes 26833498
Genes associated with rs58885260[chr1:12615670], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More