EnhancerDB
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  3. rs58950790[chr2:25839499]
Enhancers that have rs58950790[chr2:25839499]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25836360 25845235 enh33144
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs58950790[chr2:25839499]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25839485 25839500 MEF2A JASPAR yes 72490851
chr2 25839486 25839501 MEF2C JASPAR yes 72490853
chr2 25839487 25839499 MEF2A JASPAR yes 72490854
chr2 25839487 25839499 MEF2B JASPAR yes 72490855
chr2 25839487 25839499 MEF2D JASPAR yes 72490856
chr2 25839491 25839502 STAT1 JASPAR yes 72490859
chr2 25839492 25839507 FOXP1 JASPAR yes 72490860
chr2 25839494 25839504 HOXD11 JASPAR yes 72490861
chr2 25839494 25839515 IRF1 JASPAR yes 72490862
chr2 25839496 25839511 FOXP1 JASPAR yes 72490863
chr2 25839497 25839512 FOXP1 JASPAR yes 72490864
chr2 25839498 25839504 TBP TRANSFAC yes 72490865
chr2 25839498 25839513 FOXP1 JASPAR yes 72490866
chr2 25839499 25839514 FOXP1 JASPAR yes 72490867
chr2 25839499 25839520 IRF1 JASPAR yes 72490868
Genes associated with rs58950790[chr2:25839499], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More