EnhancerDB
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  3. rs58954828[chr6:30739120]
Enhancers that have rs58954828[chr6:30739120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs58954828[chr6:30739120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30739114 30739129 HNF4G JASPAR yes 101047112
chr6 30739114 30739129 LEF1 JASPAR yes 101047113
chr6 30739115 30739130 HNF4A JASPAR yes 101047114
Genes associated with rs58954828[chr6:30739120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More