EnhancerDB
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  3. rs58996937[chr19:14097582]
Enhancers that have rs58996937[chr19:14097582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14090424 14102535 enh5017
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Neural Stem Cells (H9) Thymus Heart
chr19 14097142 14097697 vista28730
VISTA
Transcript factors that have rs58996937[chr19:14097582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14096361 14098301 ZNF143 GTRD no Epithelial (MCF-7) 108390911
chr19 14096383 14098207 ZNF143 GTRD no Epithelial (MCF-7) 108390913
chr19 14096482 14098196 ZNF143 GTRD no Epithelial (MCF-7) 108390919
chr19 14096792 14098101 ZNF274 GTRD no Bone Marrow (K562) 108390921
chr19 14096810 14098091 ZNF274 GTRD no Bone Marrow (K562) 108390922
chr19 14096831 14098295 POLR2A UCSC Txn Factor no Conserved 108390923
chr19 14096987 14097583 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390925
chr19 14097010 14098043 TCF7L2 GTRD no Colon (HCT116) 108390926
chr19 14097095 14097595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390930
chr19 14097174 14097748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390946
chr19 14097221 14097785 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390955
chr19 14097227 14097823 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390956
chr19 14097235 14097846 TCF7L2 GTRD no Colon (HCT116) 108390958
chr19 14097237 14097822 TCF7L2 GTRD no Colon (HCT116) 108390959
chr19 14097244 14097680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390961
chr19 14097246 14097600 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390962
chr19 14097253 14097705 SPI1 UCSC Txn Factor no Conserved 108390964
chr19 14097255 14097611 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390965
chr19 14097278 14098457 ZNF143 GTRD no Epithelial (MCF-7) 108390968
chr19 14097284 14097624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390969
chr19 14097292 14097747 TCF7L2 GTRD no Colon (HCT116) 108390970
chr19 14097306 14097716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390971
chr19 14097324 14097634 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852815
chr19 14097324 14097634 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108390972
chr19 14097327 14098308 ZNF143 GTRD no Epithelial (MCF-7) 108390973
chr19 14097333 14097583 NRF1 UCSC Txn Factor no Conserved 108390974
chr19 14097333 14097583 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390975
chr19 14097361 14097681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390976
chr19 14097393 14098397 ZBTB33 GTRD no Lung (A549) 108390978
chr19 14097402 14098341 ZNF274 GTRD no Bone Marrow (K562) 108390979
chr19 14097409 14098474 ZBTB33 GTRD no Lung (A549) 108390980
chr19 14097427 14097647 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390981
chr19 14097442 14098069 ZNF143 GTRD no Epithelial (MCF-7) 108390982
chr19 14097446 14097682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390983
chr19 14097472 14097705 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390984
chr19 14097474 14098465 ZNF143 GTRD no Epithelial (MCF-7) 108390985
chr19 14097483 14098343 ZNF274 GTRD no Bone Marrow (K562) 108390986
chr19 14097492 14098300 ZNF274 GTRD no Bone Marrow (K562) 108390987
chr19 14097501 14098511 ZNF274 GTRD no Cervix (HeLa-S3) 108390988
chr19 14097509 14098193 ZNF143 GTRD no Epithelial (MCF-7) 108390989
chr19 14097554 14098304 ZNF143 GTRD no Epithelial (MCF-7) 108390990
chr19 14097556 14098076 ZNF274 GTRD no Blood (GM12878) 108390991
chr19 14097577 14098336 ZNF274 GTRD no Liver (HepG2) 108390992
chr19 14097581 14097595 SPI1 JASPAR yes 70811468
chr19 14097581 14097595 SPIC JASPAR yes 70811469
chr19 14097581 14097595 SPI1 JASPAR yes 112544635
chr19 14097581 14097595 SPIC JASPAR yes 112544636
Genes associated with rs58996937[chr19:14097582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More