EnhancerDB
  1. Home
  2. SNP
  3. rs59079830[chr2:227429042]
Enhancers that have rs59079830[chr2:227429042]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227413605 227431781 enh59032
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs59079830[chr2:227429042]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227429032 227429044 TGIF1 JASPAR yes 81468974
chr2 227429037 227429045 MEIS2 JASPAR yes 81468975
chr2 227429037 227429045 MEIS3 JASPAR yes 81468976
chr2 227429038 227429042 NFE TRANSFAC yes 81468977
chr2 227429038 227429049 CDX2 JASPAR yes 81468978
chr2 227429039 227429050 HOXA10 JASPAR yes 81468979
chr2 227429039 227429050 HOXC11 JASPAR yes 81468980
chr2 227429039 227429050 HOXC12 JASPAR yes 81468981
chr2 227429039 227429050 HOXC13 JASPAR yes 81468982
chr2 227429039 227429050 HOXD12 JASPAR yes 81468983
chr2 227429040 227429049 CDX1 JASPAR yes 81468984
chr2 227429040 227429050 HOXC10 JASPAR yes 81468985
chr2 227429040 227429050 HOXD11 JASPAR yes 81468986
chr2 227429040 227429050 HOXD13 JASPAR yes 81468987
Genes associated with rs59079830[chr2:227429042], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More