EnhancerDB
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  3. rs59154459[chr17:2855633]
Enhancers that have rs59154459[chr17:2855633]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs59154459[chr17:2855633]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2855626 2855641 FOXA1 JASPAR yes 52788949
chr17 2855627 2855642 FOXP1 JASPAR yes 52788950
chr17 2855628 2855640 FOXC2 JASPAR yes 52788951
chr17 2855628 2855642 FOXF2 JASPAR yes 52788952
chr17 2855629 2855640 FOXB1 JASPAR yes 52788953
chr17 2855629 2855640 FOXC1 JASPAR yes 52788954
chr17 2855630 2855634 YY1 TRANSFAC yes 52788955
chr17 2855630 2855641 FOXA1 JASPAR yes 52788956
chr17 2855630 2855648 IRF2 JASPAR yes 52788957
chr17 2855631 2855652 IRF1 JASPAR yes 52788958
chr17 2855633 2855648 PRDM1 JASPAR yes 52788959
chr17 2855633 2855648 STAT2 JASPAR yes 52788960
Genes associated with rs59154459[chr17:2855633], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More