EnhancerDB
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  3. rs59180559[chr1:55043230]
Enhancers that have rs59180559[chr1:55043230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59180559[chr1:55043230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55043227 55043242 HNF1A JASPAR yes 28994836
chr1 55043228 55043242 ONECUT3 JASPAR yes 28994837
Genes associated with rs59180559[chr1:55043230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More