EnhancerDB
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  3. rs59349082[chr1:7614493]
Enhancers that have rs59349082[chr1:7614493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs59349082[chr1:7614493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7614474 7614494 RREB1 JASPAR yes 26476278
chr1 7614483 7614493 MSC JASPAR yes 26476279
chr1 7614483 7614493 NHLH1 JASPAR yes 26476280
Genes associated with rs59349082[chr1:7614493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 7831329 7841492 + VAMP3 ENSG00000049245.8 7831329 216836 Breast 0.0749897 109