EnhancerDB
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  3. rs59405311[chr1:55031581]
Enhancers that have rs59405311[chr1:55031581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59405311[chr1:55031581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55031574 55031589 RFX5 JASPAR yes 28993080
chr1 55031576 55031592 RFX3 JASPAR yes 28993081
chr1 55031576 55031592 RFX5 JASPAR yes 28993082
chr1 55031577 55031591 EBF1 JASPAR yes 28993083
Genes associated with rs59405311[chr1:55031581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More