EnhancerDB
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  3. rs59407661[chr17:38677607]
Enhancers that have rs59407661[chr17:38677607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59407661[chr17:38677607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 21754352
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 108255234
chr17 38673467 38677708 ZNF274 GTRD no Blood (GM12878) 21754514
chr17 38673467 38677708 ZNF274 GTRD no Blood (GM12878) 108255253
chr17 38673550 38678157 ZNF274 GTRD no Blood (GM12878) 21754520
chr17 38673550 38678157 ZNF274 GTRD no Blood (GM12878) 108255258
chr17 38673550 38678157 ZNF274 GTRD no Blood (GM12878) 108255259
chr17 38673739 38677684 ZNF274 GTRD no Blood (GM12878) 21754536
chr17 38673739 38677684 ZNF274 GTRD no Blood (GM12878) 108255276
chr17 38674100 38677748 ZBTB33 GTRD no Lung (A549) 108255301
chr17 38674100 38677748 ZBTB33 GTRD no Lung (A549) 108255302
chr17 38674567 38677705 ZNF274 GTRD no Blood (GM12878) 21754618
chr17 38674567 38677705 ZNF274 GTRD no Blood (GM12878) 108255351
chr17 38674670 38677744 ZNF274 GTRD no Blood (GM12878) 21754641
chr17 38674670 38677744 ZNF274 GTRD no Blood (GM12878) 108255376
chr17 38674670 38677744 ZNF274 GTRD no Blood (GM12878) 108255377
chr17 38674872 38677647 ZNF274 GTRD no Blood (GM12878) 21754702
chr17 38674872 38677647 ZNF274 GTRD no Blood (GM12878) 108255444
chr17 38675987 38677609 ZNF274 GTRD no Blood (GM12878) 21754745
chr17 38676101 38677624 ZNF274 GTRD no Liver (HepG2) 21754747
chr17 38676136 38677701 ZNF274 GTRD no Blood (GM12878) 21754752
chr17 38676268 38677745 ZBTB33 GTRD no Lung (A549) 108255496
chr17 38676277 38677797 ZNF274 GTRD no Cervix (HeLa-S3) 21754757
chr17 38676277 38677797 ZNF274 GTRD no Cervix (HeLa-S3) 108255497
chr17 38676320 38677741 ZBTB33 GTRD no Lung (A549) 108255498
chr17 38676322 38677683 ZNF274 GTRD no Cervix (HeLa-S3) 21754759
chr17 38676401 38677643 STAT3 GTRD no Blood (OCI-LY7) 21754761
chr17 38676456 38677738 ZBTB33 GTRD no Lung (A549) 108255499
chr17 38676475 38677819 ZNF274 GTRD no Bone Marrow (K562) 21754765
chr17 38676475 38677819 ZNF274 GTRD no Bone Marrow (K562) 108255500
chr17 38676476 38677655 ZNF274 GTRD no Blood (GM12878) 21754766
chr17 38676531 38677795 ZNF274 GTRD no Cervix (HeLa-S3) 21754768
chr17 38676531 38677795 ZNF274 GTRD no Cervix (HeLa-S3) 108255501
chr17 38676541 38677647 ZNF274 GTRD no Liver (HepG2) 21754769
chr17 38676544 38677710 ZNF274 GTRD no Bone Marrow (K562) 21754770
chr17 38676551 38677681 ZNF274 GTRD no Bone Marrow (K562) 21754771
chr17 38676555 38677622 ZNF274 GTRD no Bone Marrow (K562) 21754772
chr17 38676555 38677629 ZNF274 GTRD no Bone Marrow (K562) 21754773
chr17 38676594 38677836 ZNF143 GTRD no Epithelial (MCF-7) 21754776
chr17 38676594 38677836 ZNF143 GTRD no Epithelial (MCF-7) 108255502
chr17 38676611 38677686 ZNF274 GTRD no Bone Marrow (K562) 21754779
chr17 38676611 38677759 ZBTB33 GTRD no Lung (A549) 108255503
chr17 38676612 38677635 ZNF274 GTRD no Blood (GM12878) 21754780
chr17 38676616 38677798 ZNF143 GTRD no Epithelial (MCF-7) 21754781
chr17 38676616 38677798 ZNF143 GTRD no Epithelial (MCF-7) 108255504
chr17 38676644 38677674 ZNF274 GTRD no Liver (HepG2) 21754784
chr17 38676664 38677623 TCF7L2 GTRD no Colon (HCT116) 21754786
chr17 38676692 38677774 ZNF274 GTRD no Blood (GM12878) 21754788
chr17 38676692 38677774 ZNF274 GTRD no Blood (GM12878) 108255505
chr17 38676721 38677648 ZNF274 GTRD no Blood (GM12878) 21754792
chr17 38676735 38677659 ZNF274 GTRD no Bone Marrow (K562) 21754794
chr17 38676735 38677726 ZNF274 GTRD no Liver (HepG2) 21754795
chr17 38676737 38677762 ZBTB33 GTRD no Lung (A549) 108255506
chr17 38676740 38677637 ZNF274 GTRD no Bone Marrow (K562) 21754797
chr17 38676750 38677610 ZNF274 GTRD no Bone Marrow (K562) 21754804
chr17 38676759 38677721 ZNF274 GTRD no Liver (HepG2) 21754808
chr17 38676789 38677634 ZNF143 GTRD no Epithelial (MCF-7) 21754820
chr17 38676795 38677682 TCF7L2 GTRD no Colon (HCT116) 21754822
chr17 38676810 38677700 ZNF274 GTRD no Liver (HepG2) 21754828
chr17 38676814 38677810 ZNF274 GTRD no Bone Marrow (K562) 21754830
chr17 38676814 38677810 ZNF274 GTRD no Bone Marrow (K562) 108255507
chr17 38676815 38677663 ZNF274 GTRD no Blood (GM12878) 21754832
chr17 38676838 38677687 ZNF274 GTRD no Blood (GM12878) 21754838
chr17 38676877 38677608 ZNF274 GTRD no Blood (GM12878) 21754852
chr17 38676908 38677659 ZNF274 GTRD no Bone Marrow (K562) 21754864
chr17 38676952 38677704 ZNF274 GTRD no Bone Marrow (K562) 21754887
chr17 38676982 38677610 ZBTB33 GTRD no Brain (SK-N-SH) 21754907
chr17 38676992 38677675 ZNF274 GTRD no Bone Marrow (K562) 21754909
chr17 38677010 38677624 ZNF143 GTRD no Epithelial (MCF-7) 21754914
chr17 38677450 38678654 TCF7L2 GTRD no Colon (HCT116) 21754927
chr17 38677450 38678654 TCF7L2 GTRD no Colon (HCT116) 108255508
chr17 38677450 38678654 TCF7L2 GTRD no Colon (HCT116) 108255509
chr17 38677530 38677966 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255510
chr17 38677554 38677929 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255511
chr17 38677554 38678000 GABPA UCSC Txn Factor no Conserved 108255512
chr17 38677594 38677608 TLX1 JASPAR yes 54220912
chr17 38677595 38677609 TLX1 JASPAR yes 54220913
chr17 38677599 38678249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754928
chr17 38677599 38678249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108255513
Genes associated with rs59407661[chr17:38677607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More