EnhancerDB
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  3. rs59425560[chr17:73422191]
Enhancers that have rs59425560[chr17:73422191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73418765 73428832 enh17376
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs59425560[chr17:73422191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73421911 73422695 TCF7L2 GTRD no Colon (HCT116) 21787933
chr17 73421941 73422515 TCF7L2 GTRD no Colon (HCT116) 21787934
chr17 73422019 73422741 TCF7L2 GTRD no Colon (HCT116) 21787935
chr17 73422023 73422664 ZNF143 GTRD no Epithelial (MCF-7) 21787936
chr17 73422179 73422369 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21787937
chr17 73422183 73422204 IRF1 JASPAR yes 55955942
chr17 73422184 73422199 FOXP1 JASPAR yes 55955944
chr17 73422187 73422201 SPIC JASPAR yes 55955945
chr17 73422187 73422201 STAT1 JASPAR yes 55955946
chr17 73422187 73422202 PRDM1 JASPAR yes 55955947
chr17 73422187 73422202 STAT2 JASPAR yes 55955948
chr17 73422187 73422208 IRF1 JASPAR yes 55955949
chr17 73422189 73422210 IRF1 JASPAR yes 55955950
chr17 73422191 73422212 IRF1 JASPAR yes 55955951
chr17 73422191 73422212 ZNF263 JASPAR yes 55955952
Genes associated with rs59425560[chr17:73422191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More