EnhancerDB
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  3. rs59450296[chr1:204046158]
Enhancers that have rs59450296[chr1:204046158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59450296[chr1:204046158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204046149 204046161 TAL1 JASPAR yes 34676478
chr1 204046150 204046162 BHLHE23 JASPAR yes 34676479
chr1 204046151 204046161 BHLHE22 JASPAR yes 34676480
chr1 204046151 204046161 NEUROD2 JASPAR yes 34676481
chr1 204046151 204046161 OLIG1 JASPAR yes 34676482
chr1 204046151 204046161 OLIG2 JASPAR yes 34676483
chr1 204046151 204046161 OLIG3 JASPAR yes 34676484
chr1 204046151 204046163 TAL1 JASPAR yes 34676485
chr1 204046153 204046167 RORA JASPAR yes 34676486
chr1 204046156 204046166 RORA JASPAR yes 34676487
Genes associated with rs59450296[chr1:204046158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More