EnhancerDB
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  3. rs59468439[chr12:50909022]
Enhancers that have rs59468439[chr12:50909022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59468439[chr12:50909022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50909006 50909023 NR3C1 JASPAR yes 120836490
chr12 50909006 50909023 NR3C2 JASPAR yes 120836491
chr12 50909016 50909037 IRF1 JASPAR yes 120836492
chr12 50909020 50909035 FOXP1 JASPAR yes 120836493
chr12 50909021 50909036 FOXP1 JASPAR yes 120836494
chr12 50909022 50909037 FOXP1 JASPAR yes 120836495
Genes associated with rs59468439[chr12:50909022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More