EnhancerDB
  1. Home
  2. SNP
  3. rs59476213[chr1:16500373]
Enhancers that have rs59476213[chr1:16500373]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59476213[chr1:16500373]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16500356 16500374 ESR2 JASPAR yes 27031145
chr1 16500357 16500377 ESR1 JASPAR yes 27031146
chr1 16500366 16500378 TFAP2C JASPAR yes 27031147
chr1 16500366 16500381 TFAP2A JASPAR yes 27031148
chr1 16500366 16500381 TFAP2C JASPAR yes 27031149
chr1 16500372 16500382 SP1 JASPAR yes 27031150
chr1 16500372 16500393 ZNF263 JASPAR yes 27031151
chr1 16500373 16500377 LFA1 TRANSFAC yes 27031152
chr1 16500373 16500385 INSM1 JASPAR yes 27031153
Genes associated with rs59476213[chr1:16500373], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More