EnhancerDB
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  3. rs59512399[chr16:85466727]
Enhancers that have rs59512399[chr16:85466727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs59512399[chr16:85466727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85456620 85466869 ZNF143 GTRD no Epithelial (MCF-7) 21725493
chr16 85456620 85466869 ZNF143 GTRD no Epithelial (MCF-7) 108214547
chr16 85456740 85468327 ZNF143 GTRD no Epithelial (MCF-7) 21725494
chr16 85456740 85468327 ZNF143 GTRD no Epithelial (MCF-7) 108214548
chr16 85458077 85467292 ZNF143 GTRD no Epithelial (MCF-7) 21725528
chr16 85458077 85467292 ZNF143 GTRD no Epithelial (MCF-7) 108214563
chr16 85462872 85468277 ZNF143 GTRD no Epithelial (MCF-7) 21725759
chr16 85462948 85466806 ZNF143 GTRD no Epithelial (MCF-7) 21725767
chr16 85463055 85468278 ZNF143 GTRD no Epithelial (MCF-7) 21725777
chr16 85463806 85466892 ZNF143 GTRD no Epithelial (MCF-7) 21725790
chr16 85463993 85466966 ZNF143 GTRD no Epithelial (MCF-7) 21725793
chr16 85463994 85466851 ZNF143 GTRD no Epithelial (MCF-7) 21725794
chr16 85464046 85466949 ZNF143 GTRD no Epithelial (MCF-7) 21725795
chr16 85464108 85466855 ZNF143 GTRD no Epithelial (MCF-7) 21725796
chr16 85464273 85466824 ZNF143 GTRD no Epithelial (MCF-7) 21725801
chr16 85464365 85466941 ZNF143 GTRD no Epithelial (MCF-7) 21725805
chr16 85465216 85466953 ZNF143 GTRD no Epithelial (MCF-7) 21725822
chr16 85465525 85466757 ZNF143 GTRD no Epithelial (MCF-7) 21725828
chr16 85465609 85466888 ZNF143 GTRD no Epithelial (MCF-7) 21725832
chr16 85465853 85467201 ZNF143 GTRD no Epithelial (MCF-7) 21725852
chr16 85466714 85466729 TFAP2C JASPAR yes 12060744
chr16 85466716 85466728 INSM1 JASPAR yes 12060745
chr16 85466717 85466728 TFAP2A JASPAR yes 12060746
chr16 85466717 85466728 TFAP2B JASPAR yes 12060747
chr16 85466717 85466728 TFAP2C JASPAR yes 12060748
chr16 85466718 85466727 TFAP2A JASPAR yes 12060749
chr16 85466723 85466743 TP63 JASPAR yes 12060750
chr16 85466724 85466733 SNAI2 JASPAR yes 12060751
chr16 85466724 85466734 ID4 JASPAR yes 12060752
chr16 85466724 85466734 NHLH1 JASPAR yes 12060753
chr16 85466724 85466734 TCF3 JASPAR yes 12060754
chr16 85466724 85466734 TCF4 JASPAR yes 12060755
Genes associated with rs59512399[chr16:85466727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More