EnhancerDB
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  3. rs59606456[chr16:89409200]
Enhancers that have rs59606456[chr16:89409200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59606456[chr16:89409200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738295
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738296
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 108225756
chr16 89409185 89409205 TP63 JASPAR yes 12333857
chr16 89409186 89409204 TP53 JASPAR yes 12333858
chr16 89409186 89409204 TP63 JASPAR yes 12333859
chr16 89409186 89409204 TP73 JASPAR yes 12333860
chr16 89409187 89409202 TP53 JASPAR yes 12333861
chr16 89409188 89409203 TP53 JASPAR yes 12333862
chr16 89409195 89409209 TCF7L2 JASPAR yes 12333863
chr16 89409195 89409210 LEF1 JASPAR yes 12333864
chr16 89409197 89409210 POU2F2 JASPAR yes 12333865
Genes associated with rs59606456[chr16:89409200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More